Publications

• Babu A. Manjasetty, Sunil Kumar, Andrew P. Turnbull, Niraj Kanti Tripathy (2009). Homology Modeling and Analysis of Human Proteins related to Disease:Structural Investigations into Shwachman-Bodian-Diamond Syndrome (SBDS) using a Bioinformatics Approach,.InterJRI Science and Technology, Vol. 1, Issue 2,97-104
• MHU Turabe Fazil*, Sunil Kumar*, N Subbarao, H P Pandey and Durg V. Singh (2009) Homology Modeling of a Sensor Histidine Kinase from Aeromonas hydrophila. Journal of Molecular Modeling DOI 10.1007/s00894-009-0602-2. * Equal contribution.
• Sunil Kumar, B B Sahu, N K Tripathy, B P Shaw (2009) In Silico Identification of Putative Proton Binding Sites of a Plasma Membrane H⁺-ATPase Isoform of Arabidopsis Thaliana, AHA1. J Proteomics Bioinform 2: 349-359. doi:10.4172/jpb.1000095

• Sunil Kumar, N. Subbarao , Sushmita Sahu, Mamata Ray, Priyanka Das, Prosenjit Mondal, Surendra Chandra Sabat (2009). In silico Modeling of Rice CatalaseA and Docking studies with Sucrose. Poster presented at International conference on Bioinformatics (InCoB), Singapore during 7-11 Sept., 2009.

• Fazil MHU Turabe, Kumar Sunil , Singh DV (2009). In Silico Structural Analysis Of Vibrio Cholerae Luxp: Modelling, Docking And Molecular Dynamics Simulations Studies. Indo-US Conference on Infectious Disease, TIFR Mumbai, 5-8 January, 2010

• Sunil Kumar, Priya R Debata, Prakash C Supakar (2008) Prediction of 3-dimensional structure of   cathepsin L protein of Rattus norvegicus. J Proteomics Bioinform 1: 307-314.
• Sunil kumar, Binod Bihari Sahu and B P Shaw (2007). Comparative modeling of protein of Plasma membrane H+ ATPase of Sesuvium portulacastrum. Poster presented at Internationa Conference on New Horizons in Biotechnology (NHBT -2007), NIIST, Trivendrum, India from November 26-29, 2007, Poster No.  FAB-059.
• Sunil kumar (2006). A computational Identification of novel Cathepsin L like proteins in Drosophila melanogaster genome. Poster presented at 6^th International conference in Bioinformatics (InCoB 2006) organized by DBT, JNU and IIT Delhi at Hotel Ashoka New Delhi from December 18-20, 2006, Poster No. 64.
• Vikash kumar and Sunil kumar (2004), A Rapid peptide based Alignment -free method to construct Genome trees Independent of sequence annotation. Poster presented at The 15^th International Conference on Genome Informatics. "Posters and Software Demonstrations" (GIW 2004) organized by Japanese Society for Bioinformatics, Yokohama, Japan   December 13-15, Pos. No. 152.
• Sunil kumar, Swati Nayak, Snehasish Parhi and P.C.Supakar (2003), Comparative Protein Structure Modeling. Bioinformatics India. 1(3). 11-16.
• Pagadala Nataraj Sekhar, Polavarapu B. Kavi Kishor, Lakkireddy Ananda Reddy, Prosenjit Mondal, Ardhendu K. Dash, Manoranjan Kar, Satya S. Mohanty and Surendra C. Sabat In silico modeling and hydrogen peroxide binding study of rice catalase In Silico Biology 2006; 6: 0041
• Shachindra K. Pandey, Kunwar Digvijay Narayan, Saumya Bandyopadhyay, Kinshuk C. Nayak and Subrata K. Das^*. 2009. Thiosulfate oxidation by Comamonas  sp. S23 isolated from a sulfur spring.  Curr Microbiol. 2009 58(5):516-21
   
• Sujogya K. Panda, V. Jyoti, Bhaskar Bhadra,  Kinshuk C. Nayak, Sisinthy Shivaji, Fred A. Rainey and Subrata K. Das^*. 2009.  Thiomonas bhubaneswarensis sp. nov., a novel obligately mixotrophic, moderately thermophilic, thiosulfate oxidizing bacterium. International Journal of Systematic and Evolutionary Microiology. 59: 2171-2175
   
• Kinshuk C. Nayak, Mutational bias and Gene expression level shape codon usage in Thermobifidafusca YX. In Silico Biology(2010), 9 : 1-17.

 Book Chapter: 

• Sunil Kumar. Solvent Accessibility of proteins. In Bioinformatics and Statistics in Fishries Research, 2006, Vol-III P 42-49 Published by Central Institute of Fishries and Aquaculture, Kausalyanagar, Bhubaneswar.
• Sunil Kumar. Basics in Bioinformatics. In Bioinformatics and Statistics in Fishries Research, 2005, Vol-II P 10-21 Published by Central Institute of Fishries and Aquaculture, Kausalyanagar, Bhubaneswar.